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Full Project Archive

A comprehensive ledger of technical execution, systems engineering, and research methodology.

2026

PhageLytic-ESM Architecture

Developed a machine learning pipeline to classify phage lytic proteins for therapeutic applications, converting unstructured biological data into vectorized inputs. Engineered high-dimensional embeddings from ~2,500+ enzyme sequences using the PhaLP 2.0 database and the 565 MB ESM-2 model.

ESM-2 Jupyter Machine Learning
2025 - Present

Generative Phage Lysin Architecture

Developing a hybrid Generative AI pipeline utilizing ProGen2 and ESM-2 to engineer novel phage lysins targeting multi-drug resistant Klebsiella pneumoniae. Planning to implement computational validation workflows integrating AlphaFold2 for structure prediction, Foldseek for structural clustering, and GROMACS for molecular dynamics simulations.

ProGen2 AlphaFold2 GROMACS
2025

Operations Analytics Pipeline

Architected a scalable LLM analytics engine to synthesize customer-agent transcripts, cutting review time by over 95%. Developed automated data reconciliation across 15+ disparate datasets, creating a defensible audit trail for executive reporting and enabling real-time operational visibility.

Python LLM Pandas
2025

Stellar Nexus

Co-developed a celestial-themed web forum platform. Engineered dynamic client-side scripting for threaded comments and real-time data fetching with secure user authentication.

Vanilla JS Node.js MongoDB
2025

Centralized Case Management System

Directed a cross-functional development team of 7 engineers to architect and deliver a centralized system serving ~100 users. Managed sprint life cycles, translated partner requirements into actionable technical sprints, and integrated iterative systems design improvements.

MERN Stack Cypress Scrum
2025

VertexPro Internal Automated System

Designed a secure internal workflow system with role-based access control, automated onboarding tracking, and a live photo verification system with timestamp and location tracking. Deployed via Vercel to standardize administrative processes.

React Next.js MongoDB
2024 - 2025

Dark Patterns in E-Commerce Platforms

Conducted a mixed-methods HCI study on scarcity and activity cues affecting trust and purchase behavior among Filipino users through platform audits and controlled experiments.

HCI Mixed-Methods Research
2024 - 2025

Gun Violence Research

Directed a cross-functional development team of 7 engineers to architect and deliver a centralized system serving ~100 users. Managed sprint life cycles, translated partner requirements into actionable technical sprints, and integrated iterative systems design improvements.

Data Science Hypothesis Testing
2024 - 2025

Hotel Reservation System

Designed and implemented a reservation tracking system utilizing strict Object-Oriented Programming principles with core GUI features built via Java Swing.

Java OOP Java Swing
2024 - 2025

Gut microbiome characterization of Holothuria nigra

Spearheaded a microbiological STEM study analyzing the gut bacteria of black sea cucumbers to explore potential antibacterial applications.

Laboratory Tests Swabbing